{"id":1018,"date":"2026-06-16T22:51:31","date_gmt":"2026-06-16T22:51:31","guid":{"rendered":"https:\/\/www.smreza.com\/profile\/?p=1018"},"modified":"2026-06-16T23:09:43","modified_gmt":"2026-06-16T23:09:43","slug":"biomedical-image-segmentation","status":"publish","type":"post","link":"https:\/\/www.smreza.com\/profile\/research-projects\/biomedical-image-segmentation\/","title":{"rendered":"Biomedical Image Segmentation"},"content":{"rendered":"\n<p class=\"wp-block-paragraph\">This project focuses on developing advanced machine learning and computer vision techniques for accurate segmentation of biomedical images, including 2D and 3D datasets. The goal is to enable automated extraction of anatomical structures to support scientific discovery, clinical decision-making, and large-scale biological data analysis.<\/p>\n\n\n\n<figure class=\"wp-block-image size-large is-resized\"><img fetchpriority=\"high\" decoding=\"async\" width=\"1024\" height=\"497\" src=\"https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2026\/06\/zebragish-3d-segmentation-1024x497.png\" alt=\"\" class=\"wp-image-955\" style=\"width:517px;height:auto\" srcset=\"https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2026\/06\/zebragish-3d-segmentation-1024x497.png 1024w, https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2026\/06\/zebragish-3d-segmentation-300x146.png 300w, https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2026\/06\/zebragish-3d-segmentation-768x373.png 768w, https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2026\/06\/zebragish-3d-segmentation.png 1536w\" sizes=\"(max-width: 1024px) 100vw, 1024px\" \/><\/figure>\n\n\n        <div class=\"rttpg-block-postgrid rttpg-block-wrapper rttpg-block-6d7534 tpg-filter-type-dropdown meta-visibility-show section-title-style-style1 img_hover_animation_default title-default title_position_default title_hover_border_default meta_position_default tpg-is-author-icon-default author-image-visibility-icon tpg-category-position-default readmore-btn-default-style grid-hover-overlay-type-always grid-hover-overlay-height-default hover-overlay-height-default tpg-title-border-default filter-nex-prev-btn-visible tpg-cat-style1 slider-scroll-hide act-label-style-inline\">\n            <div class=\"rt-container-fluid rt-tpg-container tpg-el-main-wrapper tpg-gutenberg clearfix grid-layout1-main\"\n                 id=\"rt-tpg-container-1433489907\"\n                 data-layout=\"grid-layout1\"\n                 data-grid-style=\"tpg-even\" data-sc-id=\"elementor\"\n                 data-el-settings=''\n                 data-el-query=''\n                 data-el-path=''>\n\t\t\t\t                <div class='tpg-header-wrapper '>\n\t\t\t\t\t\n\t\t<div class=\"tpg-widget-heading-wrapper rt-clear heading-style1 \">\n\t\t\t<span class=\"tpg-widget-heading-line line-left\"><\/span>\n\t\t\t<h2 class='tpg-widget-heading'>\n\t\t\t\t\t\t<a href=\"#\"  >\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<span>\n\t\t\t\t\t\tRecent News on this projects\t\t\t\t\t<\/span>\n\t\t\t\t\t\n\t\t\t\t\t\t\t<\/a>\n\n\t\t\t\t\t<\/h2>\t\t\t<span class=\"tpg-widget-heading-line line-right\"><\/span>\n\n\t\t\t\n\t\t<\/div>\n\n\t\t\n\t\t                <\/div>\n\n                <div class=\"rt-row rt-content-loader gutenberg-inner grid-layout1 grid-behaviour tpg-even grid_layout_wrapper\">\n\t\t\t\t\t\n<div class=\"rt-col-md-4 rt-col-sm-6 rt-col-xs-12 default rt-grid-item post-967 post type-post status-publish format-standard has-post-thumbnail hentry category-biomedical-image-segmentation category-electricity-market category-machine-learning category-news category-personality-disorders category-power-distribution-fault-pattern category-quantum-ai category-research-projects category-tick-borne-pathogen-transmission-data tag-image-segmentation tag-machine-learning tag-mental-health-disorder tag-quantum-ai tag-tick-brne-pathogen-transmission tag-undergraduate-research tag-up-poster-exhibition\"        data-id=\"967\">\n    <div class=\"rt-holder tpg-post-holder \">\n        <div class=\"rt-detail rt-el-content-wrapper\">\n\t\t\t                <div class=\"rt-img-holder tpg-el-image-wrap has-thumbnail\">\n\t\t\t\t\t<a data-id=\"967\" href=\"https:\/\/www.smreza.com\/profile\/research-projects\/five-lab-students-present-research-at-penn-state-undergraduate-exhibition-2026\/\" class=\"tpg-post-link\" target=\"_self\">\t\t\t\t\t\t<img decoding=\"async\" src=\"https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2026\/06\/2026-UP-Poster-Exhibit-by-Students-768x250.png\"\n\t\t\t\t\t\t\t class=\"rt-img-responsive\"\n\t\t\t\t\t\t\t width=\"768\"\n\t\t\t\t\t\t\t height=\"250\"\n\t\t\t\t\t\t\t alt=\"2026 UP Poster Exhibit by Students\">\n\t\t\t\t\t\t\n\t\t\t\t\t\t\t\n\t\t<\/a>\n\t\t\t\t<div class=\"overlay grid-hover-content\"><\/div>\n\t\t                <\/div>\n\t\t\t\n\t\t\t<div class=\"entry-title-wrapper\"><h3 class=\"entry-title\"><a data-id=\"967\" href=\"https:\/\/www.smreza.com\/profile\/research-projects\/five-lab-students-present-research-at-penn-state-undergraduate-exhibition-2026\/\" class=\"tpg-post-link\" target=\"_self\">Five Lab Students Present Research at Penn State Undergraduate Exhibition 2026<\/a><\/h3><\/div>\n\t\t\t                <div class=\"post-meta-tags rt-el-post-meta\">\n\t\t\t\t\t\t\t\t<span class=\"author \">\n\n\t\t\t\t<i class=\"fa fa-user \"><\/i><span class=\"author-prefix\">By<\/span><a href=\"https:\/\/www.smreza.com\/profile\/author\/smreza\/\">Sayed Mohsin Reza<\/a>\t\t\t<\/span>\n\t\t\t\t\t\t<span class=\"categories-links\">\n\t\t\t\t<i class=\"fas fa-folder-open \"><\/i><a class=\"biomedical-image-segmentation\" href=\"https:\/\/www.smreza.com\/profile\/category\/research-projects\/biomedical-image-segmentation\/\">Biomedical Image Segmentation<\/a><span class=\"rt-separator\">,<\/span><a class=\"electricity-market\" href=\"https:\/\/www.smreza.com\/profile\/category\/research-projects\/electricity-market\/\">Electricity Market<\/a><span class=\"rt-separator\">,<\/span><a class=\"machine-learning\" href=\"https:\/\/www.smreza.com\/profile\/category\/machine-learning\/\">Machine Learning<\/a><span class=\"rt-separator\">,<\/span><a class=\"news\" href=\"https:\/\/www.smreza.com\/profile\/category\/news\/\">News<\/a><span class=\"rt-separator\">,<\/span><a class=\"personality-disorders\" href=\"https:\/\/www.smreza.com\/profile\/category\/research-projects\/personality-disorders\/\">Personality Disorders<\/a><span class=\"rt-separator\">,<\/span><a class=\"power-distribution-fault-pattern\" href=\"https:\/\/www.smreza.com\/profile\/category\/research-projects\/power-distribution-fault-pattern\/\">Power Distribution Fault Pattern<\/a><span class=\"rt-separator\">,<\/span><a class=\"quantum-ai\" href=\"https:\/\/www.smreza.com\/profile\/category\/research-projects\/quantum-ai\/\">Quantum AI<\/a><span class=\"rt-separator\">,<\/span><a class=\"research-projects\" href=\"https:\/\/www.smreza.com\/profile\/category\/research-projects\/\">Research Projects<\/a><span class=\"rt-separator\">,<\/span><a class=\"tick-borne-pathogen-transmission-data\" href=\"https:\/\/www.smreza.com\/profile\/category\/research-projects\/tick-borne-pathogen-transmission-data\/\">Tick Borne Pathogen Transmission Data<\/a>\t\t\t<\/span>\n\t\t\t\t\t\t<span class=\"date\">\n\t\t\t\t<i class=\"far fa-calendar-alt \"><\/i>\t\t\t\t\t\t\t\t\t<a href=\"https:\/\/www.smreza.com\/profile\/2026\/04\/22\/\">\n\t\t\t\t\tApril 22, 2026\t\t\t\t<\/a>\n\t\t\t\t\t\t\t<\/span>\n\t\t\t                <\/div>\n\t\t\t\n\t\t\t                <div class=\"tpg-excerpt tpg-el-excerpt\">\n\t\t\t\t\t                        <div class=\"tpg-excerpt-inner\">\n\t\t\t\t\t\t\t5 Members of the Data\u2011Driven Decision Making (D3M) Lab presented four research projects at the Penn&#8230;                        <\/div>\n\t\t\t\t\t\t\t\t\t\t                <\/div>\n\t\t\t\t\t<div class=\"post-footer\">\n\t\t\t<div class=\"post-footer\">\n\t\t\t\t<div class=\"read-more\">\n\t\t\t\t\t<a data-id=\"967\" href=\"https:\/\/www.smreza.com\/profile\/research-projects\/five-lab-students-present-research-at-penn-state-undergraduate-exhibition-2026\/\" class=\"tpg-post-link\" target=\"_self\">Read More<\/a>\t\t\t\t<\/div>\n\t\t\t<\/div>\n\t\t<\/div>\n\t\t        <\/div>\n    <\/div>\n<\/div>\n<div class=\"rt-col-md-4 rt-col-sm-6 rt-col-xs-12 default rt-grid-item post-954 post type-post status-publish format-standard has-post-thumbnail hentry category-biomedical-image-segmentation category-news category-personality-disorders category-research-projects tag-dhruv-sangavi tag-machine-learning tag-mcreu tag-om-patel tag-research-experiences-for-undergraduates-reu tag-undergraduate-research\"        data-id=\"954\">\n    <div class=\"rt-holder tpg-post-holder \">\n        <div class=\"rt-detail rt-el-content-wrapper\">\n\t\t\t                <div class=\"rt-img-holder tpg-el-image-wrap has-thumbnail\">\n\t\t\t\t\t<a data-id=\"954\" href=\"https:\/\/www.smreza.com\/profile\/research-projects\/two-lab-students-receive-mcreu-for-summer-2026\/\" class=\"tpg-post-link\" target=\"_self\">\t\t\t\t\t\t<img decoding=\"async\" src=\"https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2025\/05\/mcreu-2025-768x387.png\"\n\t\t\t\t\t\t\t class=\"rt-img-responsive\"\n\t\t\t\t\t\t\t width=\"768\"\n\t\t\t\t\t\t\t height=\"387\"\n\t\t\t\t\t\t\t alt=\"mcreu-2025\">\n\t\t\t\t\t\t\n\t\t\t\t\t\t\t\n\t\t<\/a>\n\t\t\t\t<div class=\"overlay grid-hover-content\"><\/div>\n\t\t                <\/div>\n\t\t\t\n\t\t\t<div class=\"entry-title-wrapper\"><h3 class=\"entry-title\"><a data-id=\"954\" href=\"https:\/\/www.smreza.com\/profile\/research-projects\/two-lab-students-receive-mcreu-for-summer-2026\/\" class=\"tpg-post-link\" target=\"_self\">Two Lab Students Receive MCREU for Summer 2026<\/a><\/h3><\/div>\n\t\t\t                <div class=\"post-meta-tags rt-el-post-meta\">\n\t\t\t\t\t\t\t\t<span class=\"author \">\n\n\t\t\t\t<i class=\"fa fa-user \"><\/i><span class=\"author-prefix\">By<\/span><a href=\"https:\/\/www.smreza.com\/profile\/author\/smreza\/\">Sayed Mohsin Reza<\/a>\t\t\t<\/span>\n\t\t\t\t\t\t<span class=\"categories-links\">\n\t\t\t\t<i class=\"fas fa-folder-open \"><\/i><a class=\"biomedical-image-segmentation\" href=\"https:\/\/www.smreza.com\/profile\/category\/research-projects\/biomedical-image-segmentation\/\">Biomedical Image Segmentation<\/a><span class=\"rt-separator\">,<\/span><a class=\"news\" href=\"https:\/\/www.smreza.com\/profile\/category\/news\/\">News<\/a><span class=\"rt-separator\">,<\/span><a class=\"personality-disorders\" href=\"https:\/\/www.smreza.com\/profile\/category\/research-projects\/personality-disorders\/\">Personality Disorders<\/a><span class=\"rt-separator\">,<\/span><a class=\"research-projects\" href=\"https:\/\/www.smreza.com\/profile\/category\/research-projects\/\">Research Projects<\/a>\t\t\t<\/span>\n\t\t\t\t\t\t<span class=\"date\">\n\t\t\t\t<i class=\"far fa-calendar-alt \"><\/i>\t\t\t\t\t\t\t\t\t<a href=\"https:\/\/www.smreza.com\/profile\/2026\/03\/28\/\">\n\t\t\t\t\tMarch 28, 2026\t\t\t\t<\/a>\n\t\t\t\t\t\t\t<\/span>\n\t\t\t                <\/div>\n\t\t\t\n\t\t\t                <div class=\"tpg-excerpt tpg-el-excerpt\">\n\t\t\t\t\t                        <div class=\"tpg-excerpt-inner\">\n\t\t\t\t\t\t\tTwo students from the Data\u2011Driven Decision Making (D3M) Lab have been selected for the Multi\u2011Campus&#8230;                        <\/div>\n\t\t\t\t\t\t\t\t\t\t                <\/div>\n\t\t\t\t\t<div class=\"post-footer\">\n\t\t\t<div class=\"post-footer\">\n\t\t\t\t<div class=\"read-more\">\n\t\t\t\t\t<a data-id=\"954\" href=\"https:\/\/www.smreza.com\/profile\/research-projects\/two-lab-students-receive-mcreu-for-summer-2026\/\" class=\"tpg-post-link\" target=\"_self\">Read More<\/a>\t\t\t\t<\/div>\n\t\t\t<\/div>\n\t\t<\/div>\n\t\t        <\/div>\n    <\/div>\n<\/div>\n<div class=\"rt-col-md-4 rt-col-sm-6 rt-col-xs-12 default rt-grid-item post-865 post type-post status-publish format-standard has-post-thumbnail hentry category-biomedical-image-segmentation category-grants category-highlights category-news category-research-projects tag-funding tag-image-segmentation\"        data-id=\"865\">\n    <div class=\"rt-holder tpg-post-holder \">\n        <div class=\"rt-detail rt-el-content-wrapper\">\n\t\t\t                <div class=\"rt-img-holder tpg-el-image-wrap has-thumbnail\">\n\t\t\t\t\t<a data-id=\"865\" href=\"https:\/\/www.smreza.com\/profile\/research-projects\/ovpcc-excellence-in-interdisciplinary-research-seed-grant-awarded-for-automated-2d-3d-zebrafish-segmentation-using-deep-learning\/\" class=\"tpg-post-link\" target=\"_self\">\t\t\t\t\t\t<img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2025\/11\/zebrafish_brain_segmentation-768x467.png\"\n\t\t\t\t\t\t\t class=\"rt-img-responsive\"\n\t\t\t\t\t\t\t width=\"768\"\n\t\t\t\t\t\t\t height=\"467\"\n\t\t\t\t\t\t\t alt=\"OVPCC Excellence in Interdisciplinary Research Seed Grant Awarded for Automated 2D\/3D Zebrafish Segmentation Using Deep Learning\">\n\t\t\t\t\t\t\n\t\t\t\t\t\t\t\n\t\t<\/a>\n\t\t\t\t<div class=\"overlay grid-hover-content\"><\/div>\n\t\t                <\/div>\n\t\t\t\n\t\t\t<div class=\"entry-title-wrapper\"><h3 class=\"entry-title\"><a data-id=\"865\" href=\"https:\/\/www.smreza.com\/profile\/research-projects\/ovpcc-excellence-in-interdisciplinary-research-seed-grant-awarded-for-automated-2d-3d-zebrafish-segmentation-using-deep-learning\/\" class=\"tpg-post-link\" target=\"_self\">OVPCC Excellence in Interdisciplinary Research Seed Grant Awarded for Automated 2D\/3D Zebrafish Segmentation Using Deep Learning<\/a><\/h3><\/div>\n\t\t\t                <div class=\"post-meta-tags rt-el-post-meta\">\n\t\t\t\t\t\t\t\t<span class=\"author \">\n\n\t\t\t\t<i class=\"fa fa-user \"><\/i><span class=\"author-prefix\">By<\/span><a href=\"https:\/\/www.smreza.com\/profile\/author\/smreza\/\">Sayed Mohsin Reza<\/a>\t\t\t<\/span>\n\t\t\t\t\t\t<span class=\"categories-links\">\n\t\t\t\t<i class=\"fas fa-folder-open \"><\/i><a class=\"biomedical-image-segmentation\" href=\"https:\/\/www.smreza.com\/profile\/category\/research-projects\/biomedical-image-segmentation\/\">Biomedical Image Segmentation<\/a><span class=\"rt-separator\">,<\/span><a class=\"grants\" href=\"https:\/\/www.smreza.com\/profile\/category\/grants\/\">Grants<\/a><span class=\"rt-separator\">,<\/span><a class=\"highlights\" href=\"https:\/\/www.smreza.com\/profile\/category\/highlights\/\">Highlights<\/a><span class=\"rt-separator\">,<\/span><a class=\"news\" href=\"https:\/\/www.smreza.com\/profile\/category\/news\/\">News<\/a><span class=\"rt-separator\">,<\/span><a class=\"research-projects\" href=\"https:\/\/www.smreza.com\/profile\/category\/research-projects\/\">Research Projects<\/a>\t\t\t<\/span>\n\t\t\t\t\t\t<span class=\"date\">\n\t\t\t\t<i class=\"far fa-calendar-alt \"><\/i>\t\t\t\t\t\t\t\t\t<a href=\"https:\/\/www.smreza.com\/profile\/2025\/11\/05\/\">\n\t\t\t\t\tNovember 5, 2025\t\t\t\t<\/a>\n\t\t\t\t\t\t\t<\/span>\n\t\t\t                <\/div>\n\t\t\t\n\t\t\t                <div class=\"tpg-excerpt tpg-el-excerpt\">\n\t\t\t\t\t                        <div class=\"tpg-excerpt-inner\">\n\t\t\t\t\t\t\tWe are thrilled to announce that Dr. Sayed Reza, Assistant Professor of Computer Science has been&#8230;                        <\/div>\n\t\t\t\t\t\t\t\t\t\t                <\/div>\n\t\t\t\t\t<div class=\"post-footer\">\n\t\t\t<div class=\"post-footer\">\n\t\t\t\t<div class=\"read-more\">\n\t\t\t\t\t<a data-id=\"865\" href=\"https:\/\/www.smreza.com\/profile\/research-projects\/ovpcc-excellence-in-interdisciplinary-research-seed-grant-awarded-for-automated-2d-3d-zebrafish-segmentation-using-deep-learning\/\" class=\"tpg-post-link\" target=\"_self\">Read More<\/a>\t\t\t\t<\/div>\n\t\t\t<\/div>\n\t\t<\/div>\n\t\t        <\/div>\n    <\/div>\n<\/div>                <\/div>\n\n\t\t\t\t\n            <\/div>\n        <\/div>\n\t\t","protected":false},"excerpt":{"rendered":"<p>This project focuses on developing advanced machine learning and computer vision techniques for accurate segmentation of biomedical images, including 2D and 3D datasets. The goal is to enable automated extraction of anatomical structures to support scientific discovery, clinical decision-making, and large-scale biological data analysis.<\/p>\n","protected":false},"author":1,"featured_media":955,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"footnotes":""},"categories":[105,19],"tags":[],"class_list":["post-1018","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-projects","category-research-projects"],"rttpg_featured_image_url":{"full":["https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2026\/06\/zebragish-3d-segmentation.png",1536,746,false],"landscape":["https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2026\/06\/zebragish-3d-segmentation.png",1536,746,false],"portraits":["https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2026\/06\/zebragish-3d-segmentation.png",1536,746,false],"thumbnail":["https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2026\/06\/zebragish-3d-segmentation-150x150.png",150,150,true],"medium":["https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2026\/06\/zebragish-3d-segmentation-300x146.png",300,146,true],"large":["https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2026\/06\/zebragish-3d-segmentation-1024x497.png",1024,497,true],"1536x1536":["https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2026\/06\/zebragish-3d-segmentation.png",1536,746,false],"2048x2048":["https:\/\/www.smreza.com\/profile\/wp-content\/uploads\/2026\/06\/zebragish-3d-segmentation.png",1536,746,false]},"rttpg_author":{"display_name":"Sayed Mohsin Reza","author_link":"https:\/\/www.smreza.com\/profile\/author\/smreza\/"},"rttpg_comment":0,"rttpg_category":"<a href=\"https:\/\/www.smreza.com\/profile\/category\/projects\/\" rel=\"category tag\">Projects<\/a> <a href=\"https:\/\/www.smreza.com\/profile\/category\/research-projects\/\" rel=\"category tag\">Research Projects<\/a>","rttpg_excerpt":"This project focuses on developing advanced machine learning and computer vision techniques for accurate segmentation of biomedical images, including 2D and 3D datasets. The goal is to enable automated extraction of anatomical structures to support scientific discovery, clinical decision-making, and large-scale biological data analysis.","_links":{"self":[{"href":"https:\/\/www.smreza.com\/profile\/wp-json\/wp\/v2\/posts\/1018","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.smreza.com\/profile\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.smreza.com\/profile\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.smreza.com\/profile\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.smreza.com\/profile\/wp-json\/wp\/v2\/comments?post=1018"}],"version-history":[{"count":2,"href":"https:\/\/www.smreza.com\/profile\/wp-json\/wp\/v2\/posts\/1018\/revisions"}],"predecessor-version":[{"id":1024,"href":"https:\/\/www.smreza.com\/profile\/wp-json\/wp\/v2\/posts\/1018\/revisions\/1024"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/www.smreza.com\/profile\/wp-json\/wp\/v2\/media\/955"}],"wp:attachment":[{"href":"https:\/\/www.smreza.com\/profile\/wp-json\/wp\/v2\/media?parent=1018"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.smreza.com\/profile\/wp-json\/wp\/v2\/categories?post=1018"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.smreza.com\/profile\/wp-json\/wp\/v2\/tags?post=1018"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}